Make sure the "results" box on the main Scrapebox window in the lower left hand corner is set to 1000 and not like 1. If its only taking the first result then that is likely why
Also you can add a delay in custom harvester, as if the ips are getting blocked that will slow it down a bit more. Scraping 80K results is no problem at all, but you need to have everything else set appropriately as well as have it slow enough or enough proxies so they don't get blocked. but adding more results will make it work better as its pulling 100 results per page and dumping the other 99 if you have it set to only pull 1 result.